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Original Contribution |

C9ORF72 Repeat Expansion in Amyotrophic Lateral Sclerosis in the Kii Peninsula of Japan

Hiroyuki Ishiura, MD, PhD; Yuji Takahashi, MD, PhD; Jun Mitsui, MD, PhD; Sohei Yoshida, MD, PhD; Tameko Kihira, MD, PhD; Yasumasa Kokubo, MD, PhD; Shigeki Kuzuhara, MD, PhD; Laura P. W. Ranum, PhD; Tomoko Tamaoki, MD, PhD; Yaeko Ichikawa, MD, PhD; Hidetoshi Date, PhD; Jun Goto, MD, PhD; Shoji Tsuji, MD, PhD
Arch Neurol. 2012;69(9):1154-1158. doi:10.1001/archneurol.2012.1219.
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Background  In the Kii peninsula of Japan, high prevalences of amyotrophic lateral sclerosis (ALS) and parkinsonism-dementia complex have been reported. There are 2 major foci with a high prevalence, which include the southernmost region neighboring the Koza River (Kozagawa and Kushimoto towns in Wakayama prefecture) and the Hohara district (Mie prefecture).

Objective  To delineate the molecular basis of ALS in the Kii peninsula of Japan, we analyzed hexanucleotide repeat expansion in the chromosome 9 open reading frame 72 (C9ORF72) gene, which has recently been identified as a frequent cause of ALS and frontotemporal dementia in the white population.

Design  Case series.

Setting  University hospitals.

Patients  Twenty-one patients (1 familial patient and 20 sporadic patients) with ALS from Wakayama prefecture, and 16 patients with ALS and 16 patients with parkinsonism-dementia complex originating from Mie prefecture surveyed in 1994 through 2011 were enrolled in the study. In addition, 40 probands with familial ALS and 217 sporadic patients with ALS recruited from other areas of Japan were also enrolled in this study.

Main Outcome Measures  After screening by repeat-primed polymerase chain reaction, Southern blot hybridization analysis was performed to confirm the expanded alleles.

Results  We identified 3 patients with ALS (20%) with the repeat expansion in 1 of the 2 disease foci. The proportion is significantly higher than those in other regions in Japan. Detailed haplotype analyses revealed an extended shared haplotype in the 3 patients with ALS, suggesting a founder effect.

Conclusions  Our findings indicate that the repeat expansion partly accounts for the high prevalence of ALS in the Kii peninsula.

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Grahic Jump Location

Figure 1. Map of Kii peninsula of Japan and distribution of patients with amyotrophic lateral sclerosis (ALS) and parkinsonism-dementia complex (PDC). The southernmost area neighboring the Koza River (Kozagawa and Kushimoto towns) and the Hohara district and its vicinity (Minamiise town and Shima city) shown in the figure are 2 disease foci. The circles represent examined patients with ALS. The filled-in circles designate patients with the repeat expansion in C9ORF72. The triangles represent patients with the PDC phenotype. Each symbol indicates the proband in the family when multiple affected family members were observed. Patients with hexanucleotide repeat expansion in C9ORF72 are concentrated in the southernmost Kii peninsula.

Place holder to copy figure label and caption
Grahic Jump Location

Figure 2. Mutational analyses of hexanucleotide repeat expansion in C9ORF72. A, Repeat-primed polymerase chain reaction analysis was performed as previously described.8 Patients 1-3 show the characteristic sawtooth patterns with a 6-bp periodicity (blue lines). Red lines indicate DNA size markers. B, Southern blot hybridization analysis. Genomic DNA extracted from lymphoblastoid cell lines of patients 1 through 3 were subjected to Southern blot hybridization analysis, as described previously.12 Patients 1-3 showed expanded alleles. C, Result of haplotype analysis. Physical positions are shown using the reference genome (NCBI36/hg18). An extended haplotype (Kii 9p-haplotype) spanning 3.3-63 Mb was shared by the 3 patients with ALS with the repeat expansions. A 410-kb region (defined by rs911602 and rs10511810) of the Kii 9p-haplotype was shared with that in another patient with the repeat expansion from another region of Japan.14 We compared this haplotype with the Finnish haplotype; a 130-kb region (defined by rs10511816 and rs633583) was shared between the Kii 9p-haplotype and the Finnish haplotype. NC indicates negative control; P, patient.

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